Below is the full list of my publications (with prepint PDF version). Some of them are also available on ArXiv or HAL or ProdInra. See also on Google scholar .

Preprint

  1. Initial-boundary value problem to the Lifshitz-Slyozov equation with non-smooth rates at the boundary , Juan Calvo, Erwan Hingant and Romain Yvinec arXiv:2004.01947 (2020) PDF.
  2. Stochastic nonlinear model for somatic cell population dynamics during ovarian follicle activation , Frédérique Clément, Frédérique Robin, Romain Yvinec. arXiv:1903.01316 (2019) PDF.

Articles in Journal with Peer Review Committee

  1. Multiscale population dynamics in reproductive biology: singular perturbation reduction in deterministic and stochastic models , Celine Bonnet, Keltoum Chahour, Frédérique Clément, Marie Postel, Romain Yvinec. ESAIM: PROCEEDINGS AND SURVEYS, April 2020, Vol. 67, p. 72-99 PDF.
  2. The Becker-Döring process: Pathwise Convergence and Phase Transition Phenomena , Erwan Hingant, Romain Yvinec. Journal of Statistical Physics 177 (2019), n. 3, 506-527 DOI: 10.1007/s10955-019-02377-2 PDF.
  3. Biased Signaling and Allosteric Modulation at the FSHR , Flavie Landomiel, Francesco De Pascali, Pauline Raynaud, Frédéric Jean-Alphonse, Romain Yvinec, Lucie P. Pellissier, Véronique Bozon, Gilles Bruneau, Pascale Crépieux, Anne Poupon and Eric Reiter. Frontiers in Endocrinology, 10, DOI: 10.3389/fendo.2019.00148 (2019) PDF,
  4. Analysis and calibration of a linear model for structured cell populations with unidirectional motion : Application to the morphogenesis of ovarian follicles , Frédérique Clément, Frédérique Robin, Romain Yvinec. SIAM Journal on Applied Mathematics, 79(1):207--229 DOI: 10.1137/17M1161336 (2019) PDF, Supplementary Notes.
  5. Advances in computational modeling approaches in pituitary gonadotropin signaling , Romain Yvinec, Pascale Crépieux, Eric Reiter, Anne Poupon, Frédérique Clément, Expert Opinion on Drug Discovery, 13(9):799--813, DOI: 10.1080/17460441.2018.1501025 (2018) PDF, Figures, Supplementary Notes.
  6. Quasi steady state approximation of the small clusters in Becker-Döring equations leads to boundary conditions in the Lifshitz-Slyozov limit , Julien Deschamps, Erwan Hingant, Romain Yvinec. Communications in Mathematical Sciences, 15(5):1353--1384 DOI: 10.4310/CMS.2017.v15.n5.a7 (2017) PDF.
  7. β-arrestin signalling and bias in hormone-responsive GPCRs , Eric Reiter, Mohammed Akli Ayoub, Lucie P.Pellissier, Flavie Landomiel, Astrid Musnier, Aurélie Tréfier, Jorge Gandia, Francesco De Pascali, Shifa Tahir, Romain Yvinec, Gilles Bruneau, Anne Poupon, Pascale Crépieux. Molecular and Cellular Endocrinology, 449:28--41 DOI: 10.1016/j.mce.2017.01.052 (2017)
  8. Human Luteinizing Hormone and Chorionic Gonadotropin Display Biased Agonism at the LH and LH/CG Receptors ,Laura Riccetti, Romain Yvinec, Danièle Klett, Nathalie Gallay, Yves Combarnous, Eric Reiter, Manuela Simoni, Livio Casarini, Mohammed Akli Ayoub. Scientific Reports, 7(940) DOI: :10.1038/s41598-017-01078-8 (2017) PDF.
  9. Profiling of FSHR negative allosteric modulators on LH/CGR reveals biased antagonism with implications in steroidogenesis, Mohammed Akli Ayoub, Romain Yvinec, Gwenhael Jégot, James A. Dias, Sonia-Maria Poli, Anne Poupon, Pascale Crépieux, Eric Reiter, Molecular and Cellular Endocrinology, 436:10--22 DOI:10.1016/j.mce.2016.07.013 (2016) PDF Figures
  10. Computational modeling approaches in gonadotropin signaling, Mohammed Akli Ayoub, Romain Yvinec, Pascale Crépieux, Anne Poupon, Theriogenology, 86(1):22-31 DOI:10.1016/j.theriogenology.2016.04.015 (2016) PDF Figures
  11. First passage times in homogeneous nucleation: dependence on the total number of particles, Romain Yvinec, Samuel Bernard, Erwan Hingant, Laurent Pujo-Menjouet, The Journal of Chemical Physics, 144(3):034106 DOI:10.1063/1.4940033 (2016) PDF
  12. Adiabatic reduction of a piecewise deterministic markov model of stochastic gene expression with bursting transcription, Romain Yvinec, Changjing Zhuge, Jinzhi Lei, Michael C. Mackey, Journal of Mathematical Biology, 68(5):1051-1070 DOI:10.1007/s00285-013-0661-y (2014) PDF
  13. Dynamic behavior of stochastic gene expression models in the presence of bursting, Michael C Mackey, Marta Tyran-Kaminska, Romain Yvinec. SIAM J. Appl. Math., 73(5), 1830-1852., DOI : 10.1137/12090229X (2013) PDF
  14. First passage times in homogeneous nucleation and self-assembly, Romain Yvinec, Maria R. D'Orsogna, Tom Chou, The Journal of Chemical Physics, 137:244107, DOI:10.1063/1.4772598 (2012) PDF
  15. Molecular Distributions in Gene Regulatory Dynamics, Michael C Mackey, Marta Tyran-Kaminska, Romain Yvinec, Journal of Theoretical Biology, 274(1):84-96, DOI:10.1016/j.jtbi.2011.01.020 (2011). PDF

Book Chapter

  1. Workflow description to dynamically model β-arrestin signaling networks , Romain Yvinec, Mohammed Akli Ayoub, Francesco De Pascali, Pascale Crépieux, Eric Reiter, and Anne Poupon, In: Mark G H Scott, Stephane A. Laporte (eds) Beta-Arrestins: Methods and Protocols, Methods in Molecular Biology, 1957:(195--215), Springer Science+Business Media, LLC, part of Springer Nature DOI: 10.1007/978-1-4939-9158-7 (2019) PDF, Figures, Supplementary Notes.
  2. Follicle-stimulating hormone receptor: Advances and remaining challenges., Francesco De Pascali, Aurélie Tréfier, Flavie Landomiel, Véronique Bozon, Gilles Bruneau, Romain Yvinec, Anne Poupon, Pascale Crépieux, Eric Reiter, In: Arun K. Shukla (ed.), dir., G Protein-Coupled Receptors: Emerging Paradigms in Activation, Signaling and Regulation Part A (p. 1-58). International Review of Cell and Molecular Biology, 338 (1ère ed.). USA : Elsevier. 171 p., DOI:10.1016/bs.ircmb.2018.02.001 (2018) PDF Figures
  3. Deterministic and Stochastic Becker-Döring equations: Past and Recent Mathematical Developments , Erwan Hingant, Romain Yvinec. In: Holcman D. (eds) Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology. Springer, Cham . DOI: 10.1007/978-3-319-62627-7_9 (2017) PDF.
  4. Coupling of recognition and effect in GPRC signaling computational modelling approaches, Eric Reiter, Romain Yvinec, Pascale Crépieux, Anne Poupon, In: Robert D. Wells Ed., Judith S. Bond Ed., Judith Klinman Ed. , Bettie Sue Siler Masters Ed., Ellis Bell Ed., dir., Encyclopedia of the molecular life sciences (p. In press). New-York, USA : Springer-Verlag. (2016) PDF Figures

Unpublished notes

  1. Chemical Reaction Network Theory, notations and selected results , Romain Yvinec. (2016) PDF
  2. Boundary value for a nonlinear transport equation emerging from a stochastic coagulation-fragmentation type model , Julien Deschamps, Erwan Hingant, Romain Yvinec. (2015) arXiv:1412.5025 PDF. Supplementary materials here.
  3. Piecewise Deterministic Markov Processes, applications in Biology , Romain Yvinec. (2015) PDF
  4. Adiabatic reduction of models of stochastic gene expression using martingale techniques, Romain Yvinec. (2013) ArXiv:1301.1293, PDF
  5. A New Stochastic Nucleation-Polymerization Model for Understanding In Vitro Spontaneous Prion Protein Aggregation , Romain Yvinec, Samuel Bernard, Laurent Pujo-Menjouet. (2013) PDF
  6. On the bursting of gene products , Romain Yvinec and Alexandre F. Ramos. (2011) ArXiv:1112.3139 PDF

Conference journal

  1. Probabilistic and Piecewise Deterministic models in Biology , B Cloez, R Dessalles, A Genadot, F Malrieu, A Marguet, R Yvinec. ESAIM: Procs 60:225-245, Journées MAS 2016 de la SMAI, Phénomènes complexes et hétérogènes DOI: 10.1051/proc/201760225 (2017) PDF.
  2. From Becker-Döring to Lifshitz-Slyozov: deriving the non-local boundary condition of a non-linear transport equation , Romain Yvinec, Julien Deschamps, Erwan Hingant, ITM Web of Conferences Vol. 5 Num 00017 (2015) Workshop on Multiscale and Hybrid Modelling in Cell and Cell Population Biology Multiscale and hybrid modelling in cell and cell population biology (UPMC, Paris, March 16-17), DOI:10.1051/itmconf/20150500017 PDF

Thèse

  • Probabilistic modelization in molecular and cellular biology PDF, oral presentation.
  • Last update: April 2019